Stem-loop xtr-mir-219

Accession

MI0004873

Description

Xenopus tropicalis xtr-mir-219 precursor miRNA

Literature search

1 open access papers mention xtr-mir-219
(1 sentences)

Sequence

3484 reads, 234.0 reads per million, 4 experiments

auggagcucucgcccuUGAUUGUCCAAACGCAAUUCUuguuccaauagaaauaucaagccaAGAAUUGUGCCUGGACAUCUGUggcuggugaucc
..(((.(.((.(((...(((.(((((..(((((((((((.....(((....))).....)))))))))))..))))))))...))).)).).)))

Structure

au   g u  c   cuU   U     AA           uucca   g 
  gga c cu gcc   GAU GUCCA  CGCAAUUCUug     aua a
  ||| | || |||   ||| |||||  |||||||||||     |||  
  ccu g gg cgg   CUA CAGGU  GUGUUAAGAac     uau a
--   a u  u   UGU   -     CC           cgaac   a 

Annotation confidence High

Genome context

8: 25809031-25809125 [-]

Mature xtr-miR-219-5p

• Accession: MIMAT0003632
• Description: Xenopus tropicalis xtr-miR-219-5p mature miRNA
• Sequence: 17 - UGAUUGUCCAAACGCAAUUCU - 37
• Evidence: not_experimental

Mature xtr-miR-219-3p

• Accession: MIMAT0052131
• Description: Xenopus tropicalis xtr-miR-219-3p mature miRNA
• Sequence: 62 - AGAAUUGUGCCUGGACAUCUGU - 83
• Evidence: not_experimental

References