miRBase entry: xtr-mir-29c

Stem-loop xtr-mir-29c


Accession
MI0004918
Description
Xenopus tropicalis xtr-mir-29c precursor miRNA


Sequence

ucccuuacacaggaUGACCGAUCUCUCUUGGUGUUCagaggcucaggucuucaucUAGCACCAUUUGAAAUCGGUuauaauguaagguga
(((((((((....(((((((((.((...(((((((..(((((....))))).....)))))))...)).)))))))))..))))))).))

Structure
  -       cagg         C  UCU       ---Ca     u 
uc ccuuaca    aUGACCGAU UC   UGGUGUU     gaggc c
|| |||||||    ||||||||| ||   |||||||     |||||  
ag ggaaugu    uauUGGCUA AG   ACCACGA     uucug a
  u       --aa         A  UUU       Ucuac     g 


Annotation confidence Not enough data
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Genome context
chr2: 48076534-48076623 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-29c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-29c-5p

Accession MIMAT0003676
Description Xenopus tropicalis xtr-miR-29c-5p mature miRNA
Sequence 15 - UGACCGAUCUCUCUUGGUGUUC - 36
Evidence not_experimental

Mature xtr-miR-29c-3p

Accession MIMAT0003677
Description Xenopus tropicalis xtr-miR-29c-3p mature miRNA
Sequence 56 - UAGCACCAUUUGAAAUCGGU - 75
Evidence not_experimental

References