Stem-loop bta-mir-29c

Accession

MI0005044

Description

Bos taurus bta-mir-29c precursor miRNA

Literature search

31 open access papers mention bta-mir-29c
(100 sentences)

Sequence

5485 reads, 209 reads per million, 76 experiments

aucucuuacacaggcugaccgauuucuccugguguucagagucuguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguaggggga
..((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))..

Structure

au        -  ggc           ucc       c   gucu 
  cucuuaca ca   ugaccgauuuc   ugguguu aga    g
  |||||||| ||   |||||||||||   ||||||| |||    u
  ggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu    u
ag        a  ---           UUU       -   guuu 

Annotation confidence Not enough data

Genome context

chr16: 77733161-77733248 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-29c

Mature bta-miR-29c

• Accession: MIMAT0003829
• Description: Bos taurus bta-miR-29c mature miRNA
• Sequence: 54 - UAGCACCAUUUGAAAUCGGUUA - 75
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988