Stem-loop mtr-MIR395i

Accession

MI0005076

Description

Medicago truncatula mtr-MIR395i precursor miRNA

Literature search

5 open access papers mention mtr-MIR395i
(12 sentences)

Sequence

4446 reads, 40.0 reads per million, 111 experiments

gAGUUCCUCUGAAUGCUUCAAucaugagacaaucuauaugaauaguucuuguucaAUGAAGUGUUUGGGGGAACUC
((((((((((((((((((((....((((.(((.((((....))))...))))))).))))))))))))))))))))

Structure

                    Auca    a   --u    a 
gAGUUCCUCUGAAUGCUUCA    ugag caa   cuau u
||||||||||||||||||||    |||| |||   ||||  
CUCAAGGGGGUUUGUGAAGU    acuu guu   gaua g
                    ---A    -   cuu    a 

Annotation confidence High

Genome context

chr5: 16656267-16656342 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR395i

Mature mtr-miR395i-5p

• Accession: MIMAT0054753
• Description: Medicago truncatula mtr-miR395i-5p mature miRNA
• Sequence: 2 - AGUUCCUCUGAAUGCUUCAA - 21
• Evidence: experimental ; unknown

Mature mtr-miR395i-3p

• Accession: MIMAT0003862
• Description: Medicago truncatula mtr-miR395i-3p mature miRNA
• Sequence: 56 - AUGAAGUGUUUGGGGGAACUC - 76
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638