Stem-loop osa-MIR395r

Accession

MI0005092

Description

Oryza sativa osa-MIR395r precursor miRNA

Literature search

39 open access papers mention osa-MIR395r
(166 sentences)

Sequence

24 reads, 17 reads per million, 2 experiments

gaguucccuucaaccacuucacguggcacuauuuuaggaccuacuauGUGAAGUGUUUGGGGGAACUC
(((((((((.(((.((((((((((((..(((...)))..))....)))))))))).))))))))))))

Structure

         u   c          ----  ca   u 
gaguucccu caa cacuucacgu    gg  cua  
||||||||| ||| ||||||||||    ||  ||| u
CUCAAGGGG GUU GUGAAGUGua    cc  gau  
         -   U          ucau  ag   u 

Annotation confidence Not enough data

Comments

Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1].

Genome context

Unknown

Mature osa-miR395r

• Accession: MIMAT0003878
• Description: Oryza sativa osa-miR395r mature miRNA
• Sequence: 48 - GUGAAGUGUUUGGGGGAACUC - 68
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638