Dead hairpin entry

Stem-loop osa-MIR810a

Accession

MI0005229

Description

Oryza sativa osa-MIR810a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

3 open access papers mention osa-MIR810a
(4 sentences)

Sequence

328421 reads, 1475.0 reads per million, 142 experiments

aauauucacuaugguugccaucauaagcccaccacauguggcucgcaugcuuaaauaacuaacggcauaauuagaucacUUGAUGACGACGUAUAUCGGUguucgcuauauauacuaucuacugguaaguauauauagcgAACACCGAUAUGCGUCAUCAUCaagugauuuaauuaugccguuaguuaagcaugcgagccacauguggugagcuuacgaugacgaccacaguuuguu
.......(((.((((((.((((.(((((.((((((((((((((((((((((((....(((((((((((((((((((((((((((((.((((((((((((((((((((((((((((((((....))).))))))))))))))))))))))))))))).))))))))))))))))))))))))))))))))))))))))))))))))))))).))))).)))).)))))).))).....

Structure

aauauuc   a      c    a     c                        aaua                             C                             -   u 
       acu ugguug cauc uaagc caccacauguggcucgcaugcuua    acuaacggcauaauuagaucacUUGAUGA GACGUAUAUCGGUguucgcuauauauacu auc a
       ||| |||||| |||| ||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  
       uga accagc guag auucg gugguguacaccgagcguacgaau    ugauugccguauuaauuuagugaaCUACU CUGCGUAUAGCCACAAgcgauauauauga ugg c
--uuguu   c      a    c     a                        ----                             A                             a   u