Dead hairpin entry

Stem-loop osa-MIR812a

Accession

MI0005233

Description

Oryza sativa osa-MIR812a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812a
(18 sentences)

Sequence

204301 reads, 794.0 reads per million, 142 experiments

accuccgucccaaaauaagugcaguuuuacacuauucaucuccaaaGUUUGAUCGUUCGUCUUAUUUGAAaauuuuuuaugauuacuauuuuuauuguuauuacaugauaaaacaugaauaguauuuuaugugugacuaauuuuuuuaaaaauuuucauaaauuuuucAAAUAAGACGGACGGUUAAACGUUggacacggauuuucacggcugcacuuauuuugaaacggaggu
((((((((..((((((((((((((((.......((((...(((((.((((((((((((((((((((((((((...(((((((.....(((((((..((((((((((.((((((.((.....)).)))))))))))).)))).....)))))))..))))))).)))))))))))))))))))))))))).)))))...))))......))))))))))))))))..))))))))

Structure

        cc                uuacacu    auc     a                          uuu       uuacu       ---uu    -      g      c  g 
accuccgu  caaaauaagugcaguu       auuc   uccaa GUUUGAUCGUUCGUCUUAUUUGAAaa   uuuauga     auuuuua     guua uuacau auaaaa au a
||||||||  ||||||||||||||||       ||||   ||||| ||||||||||||||||||||||||||   |||||||     |||||||     |||| |||||| |||||| || a
uggaggca  guuuuauucacgucgg       uagg   aggUU CAAAUUGGCAGGCAGAAUAAAcuuuu   aaauacu     uaaaaau     uaau agugug uauuuu ug u
        aa                -cacuuu    cac     G                          --u       ---uu       uuuuu    c      -      a  a