miRBase entry: osa-MIR812b

Dead hairpin entry

Stem-loop osa-MIR812b


Accession
MI0005234
Description
Oryza sativa osa-MIR812b precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
9 open access papers mention osa-MIR812b
(15 sentences)

Sequence

144879 reads, 602.0 reads per million, 142 experiments
guauccguaucuacGUUUGACCGUUCGUCUUAUUUGAAaauuuuaugaaaagauuaaaaaaauagucacgcauaaaguaauauucauguuuuaucaucuaauaacaauaaaaauacuaaucauuaaaaauuuucAAAUAAGACGGACGGUUAAACGUUggacacgaauac
((((.(((.(((((((((((((((((((((((((((((((((((((((...(((((......)))))........((((.......((((............)))).......))))..))))..))))))))))))))))))))))))))))))).)))).))).))))

Structure
    c   a    -                               --    aaagauuaaaaaaauagucacgcauaa    auauuca    uuauc 
guau cgu ucua cGUUUGACCGUUCGUCUUAUUUGAAaauuuu  auga                           agua       uguu     a
|||| ||| |||| |||||||||||||||||||||||||||||||  ||||                           ||||       ||||      
caua gca aggU GCAAAUUGGCAGGCAGAAUAAAcuuuuaaaa  uacu                           ucau       acaa     u
    a   c    U                               au    -------------------------aa    aaaaaua    uaauc