Dead hairpin entry

Stem-loop osa-MIR812c

Accession

MI0005235

Description

Oryza sativa osa-MIR812c precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812c
(15 sentences)

Sequence

187403 reads, 649.0 reads per million, 142 experiments

gguuuccgcgucuaauGUUUGACCGUCCAUCUUAUUUGAaaaaaauuaaaaacauaagucaugcauaaaauauuauucauguuuuaucauuuaacaauaauaauaacaccaaucauaaaaaaaaauuauAUAAGACGGACGGUUAAACGUUGGacacggaaacc
((((((((.(((((((((((((((((((.((((((.(((............((....)).(((.(((((((((.....))))))))))))...................................))).)))))).))))))))))))))))))).))))))))

Structure

        c                   A      U   --------------aaaaaauuaaaaacauaaguc   c         u 
gguuuccg gucuaauGUUUGACCGUCC UCUUAU UGA                                   aug auaaaauau a
|||||||| ||||||||||||||||||| |||||| |||                                   ||| ||||||||| u
ccaaaggc caGGUUGCAAAUUGGCAGG AGAAUA auu                                   uac uauuuugua u
        a                   C      u   aaaaaaaaauacuaaccacaauaauaauaacaauu   -         c