Dead hairpin entry

Stem-loop osa-MIR812d

Accession

MI0005236

Description

Oryza sativa osa-MIR812d precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812d
(16 sentences)

Sequence

67871 reads, 265.0 reads per million, 142 experiments

cguauccaacauuugaucaucugccuuauucgaaaaauuuauaaaaaaaaacAAGUCACGCAUAAAGUAUUAuucauguuuuaucauauaagaacaauaaaaauacuaaucauaaaaaaaguAAAUAAGACGGACGGUUAAACGUUggacacg
(((.((((((.(((((((.((((.((((((.......(((((............((...))....((((((.((..((((((........))))))..)).))))))....))))).......)))))).)))).))))))).)))))).)))

Structure

   a      a       a    c      cgaaaaa     --------------------------------------aaaaaaaaacAA  C 
cgu uccaac uuugauc ucug cuuauu       uuuau                                                  GU  
||| |||||| ||||||| |||| ||||||       |||||                                                  || A
gca aggUUG AAAUUGG AGGC GAAUAA       aaaua                                                  CG  
   c      C       C    A      Augaaaa     cuaaucauaaaaauaacaagaauauacuauuuuguacuuAUUAUGAAAUA  C