Dead hairpin entry

Stem-loop osa-MIR812e

Accession

MI0005237

Description

Oryza sativa osa-MIR812e precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812e
(15 sentences)

Sequence

161138 reads, 643.0 reads per million, 142 experiments

guuuuagugcccaacUUUGACCGUCCGUCUUAUUUGAAAAuuuuuuuauuacuauuuuuauuguuauuagaugauaaaauauaaauauuacuucaugcgugacuuaauuuuuaaaaaaauuucauaaaauuuuuAAAUAAGACGGACGGUUAAACGUUggacacggaaac
(((((.(((.((((((((((((((((((((((((((((((((((...........((((((((((....))))))))))..((((.((((..(((....)))..)))).))))............))))))))))))))))))))))))))))).))))).))).)))))

Structure

     a   c     -                             uuuauuacuauuuuuauuguuauuagaugauaaaaua    u    cu   u 
guuuu gug ccaac UUUGACCGUCCGUCUUAUUUGAAAAuuuu                                     uaaa auua  uca g
||||| ||| ||||| |||||||||||||||||||||||||||||                                     |||| ||||  |||  
caaag cac ggUUG AAAUUGGCAGGCAGAAUAAAuuuuuaaaa                                     auuu uaau  agu c
     g   a     C                             -------------------------uacuuuaaaaaa    u    uc   g