Stem-loop osa-MIR814b

Accession

MI0005240

Description

Oryza sativa osa-MIR814b precursor miRNA

Literature search

3 open access papers mention osa-MIR814b
(8 sentences)

Sequence

115997 reads, 514.0 reads per million, 142 experiments

accggacgagacacuucauaguACAACGAAUCUGGACAUGaAGAUUCGUUGUACUAUAAAgugucucgucuggu
((((((((((((((((.((((((((((((((((........)))))))))))))))).))))))))))))))))

Structure

                c                GGA 
accggacgagacacuu auaguACAACGAAUCU   C
|||||||||||||||| ||||||||||||||||    
uggucugcucugugAA UAUCAUGUUGCUUAGA   A
                A                aGU 

Annotation confidence Low

Comments

miR814 was misnamed miR573 by Luo et al [1].

Genome context

2: 26341211-26341284 [+]

Mature osa-miR814b-5p

• Accession: MIMAT0004056
• Description: Oryza sativa osa-miR814b-5p mature miRNA
• Sequence: 23 - ACAACGAAUCUGGACAUG - 40
• Evidence: experimental ; cloned [1], Northern [1]

Mature osa-miR814b-3p

• Accession: MIMAT0056006
• Description: Oryza sativa osa-miR814b-3p mature miRNA
• Sequence: 42 - AGAUUCGUUGUACUAUAAA - 60
• Evidence: experimental ; unknown

References

1. PubMed ID: 16959252
   Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
   "Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH"
   "FEBS Lett (2006) 580:5111-5116