Stem-loop osa-MIR814c

Accession

MI0005241

Description

Oryza sativa osa-MIR814c precursor miRNA

Literature search

2 open access papers mention osa-MIR814c
(7 sentences)

Sequence

106763 reads, 432.0 reads per million, 142 experiments

accagaugugacacuucauAGUACAACGAAUCUGGACAGgaagcAUGUCCGGAUUCGUUAUACUAUAAaguguccuauucggu
(((.((((.(((((((.((((((.((((((((((((((.......)))))))))))))).)))))).))))))).)))).)))

Structure

   a    u       c      C              Gg 
acc gaug gacacuu auAGUA AACGAAUCUGGACA  a
||| |||| ||||||| |||||| ||||||||||||||  a
ugg uuau cugugaA UAUCAU UUGCUUAGGCCUGU  g
   c    c       A      A              Ac 

Annotation confidence Medium

Comments

miR814 was misnamed miR573 by Luo et al [1].

Genome context

2: 10889672-10889754 [-]

Mature osa-miR814c-5p

• Accession: MIMAT0004057
• Description: Oryza sativa osa-miR814c-5p mature miRNA
• Sequence: 20 - AGUACAACGAAUCUGGACAG - 39
• Evidence: experimental ; cloned [1], Northern [1]

Mature osa-miR814c-3p

• Accession: MIMAT0056007
• Description: Oryza sativa osa-miR814c-3p mature miRNA
• Sequence: 45 - AUGUCCGGAUUCGUUAUACUAUAA - 68
• Evidence: experimental ; unknown

References

1. PubMed ID: 16959252
   Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
   "Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH"
   "FEBS Lett (2006) 580:5111-5116