Stem-loop osa-MIR816

Accession

MI0005245

Description

Oryza sativa osa-MIR816 precursor miRNA

Literature search

1 open access papers mention osa-MIR816
(1 sentences)

Sequence

28542 reads, 102.0 reads per million, 141 experiments

auGUGACAUAUUUUACUACAACgaaucuggauaugacagagguauguuuaaAUUCGUAGUAUUAGGAUGUGUCACau
(((((((((((((((.(((.((((((.((((((((.(....))))))))).)))))).))).)))))))))))))))

Structure

               C   A      c        a a 
auGUGACAUAUUUUA UAC ACgaau uggauaug c g
||||||||||||||| ||| |||||| |||||||| |  
uaCACUGUGUAGGAU AUG UGCUUA auuuguau g a
               U   A      a        - g 

Annotation confidence Medium

Comments

miR816 was misnamed miR576 by Luo et al [1].

Genome context

10: 21808333-21808409 [+]

Mature osa-miR816-5p

• Accession: MIMAT0004061
• Description: Oryza sativa osa-miR816-5p mature miRNA
• Sequence: 3 - GUGACAUAUUUUACUACAAC - 22
• Evidence: experimental ; cloned [1], Northern [1]

Mature osa-miR816-3p

• Accession: MIMAT0056011
• Description: Oryza sativa osa-miR816-3p mature miRNA
• Sequence: 52 - AUUCGUAGUAUUAGGAUGUGUCAC - 75
• Evidence: experimental ; unknown

References

1. PubMed ID: 16959252
   Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
   "Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH"
   "FEBS Lett (2006) 580:5111-5116