Dead hairpin entry

Stem-loop osa-MIR818b

Accession

MI0005248

Description

Oryza sativa osa-MIR818b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

11 open access papers mention osa-MIR818b
(20 sentences)

Sequence

84485 reads, 273.0 reads per million, 142 experiments

CCUCCGUCCCAUAAUAUAAGAGAUuuuagauggaugugauacaucucaguacaaugaaucuguacuauaauauaucauauccauccaaaAUCCCUUAUAUUAUGGGACGGAGG
((((((((((((((((((((.((((((.(((((((((((((......((((((.......))))))......))))))))))))).)))))).))))))))))))))))))))

Structure

                    A      a             caucuc      au 
CCUCCGUCCCAUAAUAUAAG GAUuuu gauggaugugaua      aguaca  g
|||||||||||||||||||| |||||| |||||||||||||      ||||||  a
GGAGGCAGGGUAUUAUAUUC CUAaaa cuaccuauacuau      ucaugu  a
                    C      c             auaaua      cu