Dead hairpin entry

Stem-loop osa-MIR818c

Accession

MI0005249

Description

Oryza sativa osa-MIR818c precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

11 open access papers mention osa-MIR818c
(28 sentences)

Sequence

48163 reads, 174.0 reads per million, 142 experiments

auaauauacucauuucguCCUAUAAUAUAAGGGAUUUUGaagggaugugacacauccuagcuauaaccauauaucuagacauagcuaggaacauauaucuagacaugcucuugucuagauauauguguuauaucucuccaaAAUCCCUUAUAUUAUGGGACGGAugaauauguuau
((((((((.(((((.((((((((((((((((((((((((.(((((((((((...((((((((((................))))))))))(((((((((((((((......)))))))))))))))))))))))))).))))))))))))))))))))))))))))).))))))))

Structure

        c     u                        a           acauccuagcuauaaccauauaucuagacauagcuagga               ug 
auaauaua ucauu cguCCUAUAAUAUAAGGGAUUUUG agggaugugac                                       acauauaucuagaca  c
|||||||| ||||| |||||||||||||||||||||||| |||||||||||                                       |||||||||||||||   
uauuguau aguAG GCAGGGUAUUAUAUUCCCUAAaac ucucuauauug                                       uguauauagaucugu  u
        a     -                        c           ---------------------------------------               uc