Dead hairpin entry

Stem-loop osa-MIR818d

Accession

MI0005250

Description

Oryza sativa osa-MIR818d precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

12 open access papers mention osa-MIR818d
(30 sentences)

Sequence

148134 reads, 466.0 reads per million, 142 experiments

uuccuauuaauuguuacucucucCAUCCCAUAAUAUAAGGgauuuuagagggaugugaucuagauucguaguccgaggaaacaucacauaccucuaaaauccCUUAUAUUAUGGGACGGAGGgaguacuaguuuaggaa
.(((((..(((((.((((((((((.((((((((((((((((((((((((((..((((((.....((((.....)))).....))))))..)))))))))))))))))))))))))).)))))))))).)))))))))).

Structure

u     uu     u          A                          ga      cuaga    u 
 uccua  aauug uacucucucC UCCCAUAAUAUAAGGgauuuuagagg  ugugau     uucg a
 |||||  ||||| |||||||||| ||||||||||||||||||||||||||  ||||||     |||| g
 aggau  uugau augagGGAGG AGGGUAUUAUAUUCccuaaaaucucc  acacua     gagc u
a     --     c          C                          au      caaag    c