Dead hairpin entry

Stem-loop osa-MIR821b

Accession

MI0005267

Description

Oryza sativa osa-MIR821b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention osa-MIR821b
(6 sentences)

Sequence

15564 reads, 76.0 reads per million, 142 experiments

cuaaaugauuucaauugaaaAAGUCAUCAACAAAAAAGUUGAAUaacuuaucaagaucuaaaacuuuuauuuuuguuauuucuucauccgacgaaauguuaguaauauuauucacaaauuuuacauauauguguuaaaguuuauaaaaccagauaagagauaugacaauuuuauaaauaauguuaccaucacuuugucguaugaagaaauaaccacaauaaaaguuuuagaucuugaagaguuauucaacUUUGUUGUUGAUGACUUUUUCaguugauaucauuuag
(((((((((.(((((((((((((((((((((((.(((((((((((((((.(((((((((((((((((((((...(((((((((((((.(((((((.((...(((((((((((...(((((.(.(((((...((((...((((...))))..))))....)))))).)))))....)))))))))))...)).))))))).)))))))))))))...))))))))))))))))))))).))))))))))))))).))))))))))))))))))))))).)))))))))

Structure

         u                       A               a                     uuu             c       a  uua           -cac     u a     -aug    aaa    a 
cuaaaugau ucaauugaaaAAGUCAUCAACAA AAAGUUGAAUaacuu ucaagaucuaaaacuuuuauu   guuauuucuucau cgacgaa ug   guaauauuauu    aaauu u cauau    uguu   guuu  
||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   ||||||||||||| ||||||| ||   |||||||||||    ||||| | |||||    ||||   |||| u
gauuuacua aguugaCUUUUUCAGUAGUUGUU UUUcaacuuauugag aguucuagauuuugaaaauaa   caauaaagaagua gcuguuu ac   cauuguaauaa    uuuaa a guaua    auag   caaa  
         u                       G               a                     cac             u       c  uac           auau     c -     gaga    -ac    a