Accession
MI0005412
Description
Arabidopsis thaliana
ath-MIR854a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Literature search
5 open access papers mention ath-MIR854a
(22 sentences)
(22 sentences)
Sequence
16352
reads,
140.0
reads per million, 175 experiments
cgGAUGAGGAUAGGGAGGAGGAGuaugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucauagaaacaacaguaaguugcagagguggugcaagaaacaagauaggcuacuuaucaagugcuucaaagccaucacgUUUCUGACGGACAAGAUAAGcugcuucucuucuacuacagcuauuccg
((((..((..(((((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).((((((..(((.((((((((...)))).......)))))))..))))))................)))))))))))).)))...))..))))
((((..((..(((((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).((((((..(((.((((((((...)))).......)))))))..))))))................)))))))))))).)))...))..))))
Structure
UG -GA - ugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucauagaaacaacaguaaguugcagagguggugca aa a ------- a
cgGA AG UAG GGAGGAGGAGua agaaac gau ggcu acuu
|||| || ||| |||||||||||| |||||| ||| |||| |||| u
gccu uc auc ucuucucuucgu UCUUUg cua ccga ugaa
ua gac a ----------------------------------------------------------------------------------------cGAAUAGAACAGGCAG ca - aacuucg c
