Accession
MI0005414
Description
Arabidopsis thaliana
ath-MIR854c precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Literature search
5 open access papers mention ath-MIR854c
(19 sentences)
(19 sentences)
Sequence
12969
reads,
118.0
reads per million, 173 experiments
cgGAUGAGGAUAGGGAGGAGGAGuaugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaccaacaguaaguugcagagguggugcaagaaacaagauaggcuacuuaucaagugcuucaaagccAUCACGUUUCUGACAGACAAGauaagcugcuucucuucuacuacagcuauuccg
((((..((..(((((((((((((((((((((......)))))).........((((.((((((((((((......))..((((((.....))))))................))))..)))))))))).((((((..(((.((((((((...)))).......)))))))..))))))................)))))))))))).)))...))..))))
((((..((..(((((((((((((((((((((......)))))).........((((.((((((((((((......))..((((((.....))))))................))))..)))))))))).((((((..(((.((((((((...)))).......)))))))..))))))................)))))))))))).)))...))..))))
Structure
UG -GA - ugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaccaacaguaaguugcagagguggugca aa a ------- a
cgGA AG UAG GGAGGAGGAGua agaaac gau ggcu acuu
|||| || ||| |||||||||||| |||||| ||| |||| |||| u
gccu uc auc ucuucucuucgu UCUUUG CUA ccga ugaa
ua gac a ----------------------------------------------------------------------------------------cgaauaGAACAGACAG CA - aacuucg c
