Accession
MI0005415
Description
Arabidopsis thaliana
ath-MIR854d precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Literature search
5 open access papers mention ath-MIR854d
(19 sentences)
(19 sentences)
Sequence
17330
reads,
149.0
reads per million, 177 experiments
cgGAUGAGGAUAGGGAGGAGGAGuaugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaacaacaguaaguugcagagguggugcaagaaacaagauagguuacuuaucaagugcuucaaggccaucacgUUUCUGACGGACAAGAUAAGuugcuucucuucuaccacagcuauuccg
((((..((.....((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).................(((((((..((.(.(((((((......)))).))).).))..))))))))))))))))))).......))..))))
((((..((.....((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).................(((((((..((.(.(((((((......)))).))).).))..))))))))))))))))))).......))..))))
Structure
UG --GAUAG ugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaacaacaguaaguugcagagguggugcaagaaacaagauagguu aa g u - ca
cgGA AG GGAGGAGGAGua acuuauc gu c uca aggc u
|||| || |||||||||||| ||||||| || | ||| ||||
gccu uc ucuucucuucgu uGAAUAG CA G AGU UUUg c
ua gacacca ------------------------------------------------------------------------------------------------------------------------ AA G C C ca
