Accession
MI0005415
Description
Arabidopsis thaliana
ath-MIR854d precursor miRNA
Literature search
5 open access papers mention ath-MIR854d
(19 sentences)
(19 sentences)
Sequence
17330
reads,
149.0
reads per million, 177 experiments
cgGAUGAGGAUAGGGAGGAGGAGuaugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaacaacaguaaguugcagagguggugcaagaaacaagauagguuacuuaucaagugcuucaaggccaucacgUUUCUGACGGACAAGAUAAGuugcuucucuucuaccacagcuauuccg
((((..((.....((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).................(((((((..((.(.(((((((......)))).))).).))..))))))))))))))))))).......))..))))
((((..((.....((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).................(((((((..((.(.(((((((......)))).))).).))..))))))))))))))))))).......))..))))
Structure
UG --GAUAG ugauacgagcauguaucauuucagugagcacguaccuccagcgcgggagagcaagagcuugagugaagcucacagaaacaacaguaaguugcagagguggugcaagaaacaagauagguu aa g u - ca
cgGA AG GGAGGAGGAGua acuuauc gu c uca aggc u
|||| || |||||||||||| ||||||| || | ||| ||||
gccu uc ucuucucuucgu uGAAUAG CA G AGU UUUg c
ua gacacca ------------------------------------------------------------------------------------------------------------------------ AA G C C ca
Annotation confidence
Low
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Genome context
chr5: 11689861-11690081 [-]
Database links
Mature ath-miR854d-5p
| Accession | MIMAT0004283 |
| Description | Arabidopsis thaliana ath-miR854d-5p mature miRNA |
| Sequence | 3 - GAUGAGGAUAGGGAGGAGGAG - 23 |
| Evidence |
experimental
Northern [1] |
Mature ath-miR854d-3p
| Accession | MIMAT0053882 |
| Description | Arabidopsis thaliana ath-miR854d-3p mature miRNA |
| Sequence | 174 - UUUCUGACGGACAAGAUAAG - 193 |
| Evidence |
experimental
unknown |
References
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