Stem-loop bta-mir-19b-1

Accession

MI0005461

Description

Bos taurus bta-mir-19b-1 precursor miRNA mir-19

Gene
family

RF00245; mir-19

Literature search

93 open access papers mention bta-mir-19b-1
(302 sentences)

Sequence

2086616 reads, 547.0 reads per million, 318 experiments

cacuguucuaugguuAGUUUUGCAGGUUUGCAUCCAGCugugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagug
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))

Structure

     uu                 -  -      UC    ugugu 
cacug  cuaugguuAGUUUUGCA GG UUUGCA  CAGC     g
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 

Annotation confidence High

Genome context

12: 65689996-65690082 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-19b-1

Mature bta-miR-19b-5p

• Accession: MIMAT0060974
• Description: Bos taurus bta-miR-19b-5p mature miRNA
• Sequence: 16 - AGUUUUGCAGGUUUGCAUCCAGC - 38
• Evidence: experimental ; unknown

Mature bta-miR-19b-3p

• Accession: MIMAT0004337
• Description: Bos taurus bta-miR-19b-3p mature miRNA
• Sequence: 54 - UGUGCAAAUCCAUGCAAAACUGA - 76
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343