Stem-loop bta-mir-19b

Accession

MI0005461

Description

Bos taurus bta-mir-19b precursor miRNA mir-19

Gene
family

RF00245; mir-19

Literature search

10 open access papers mention bta-mir-19b
(46 sentences)

Sequence

20630 reads, 326 reads per million, 76 experiments

cacuguucuaugguuaguuuugcagguuugcauccagcugugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagug
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))

Structure

     uu                 -  -      uc    ugugu 
cacug  cuaugguuaguuuugca gg uuugca  cagc     g
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 

Annotation confidence High

Genome context

chr12: 66421815-66421901 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-19b

Mature bta-miR-19b

• Accession: MIMAT0004337
• Description: Bos taurus bta-miR-19b mature miRNA
• Sequence: 54 - UGUGCAAAUCCAUGCAAAACUGA - 76
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343