Stem-loop mmu-mir-874

Accession

MI0005479

Symbol

MGI: Mir874

Description

Mus musculus mmu-mir-874 precursor miRNA mir-874

Gene
family

RF00919; mir-874

Literature search

14 open access papers mention mmu-mir-874
(36 sentences)

Sequence

3762 reads, 22 reads per million, 73 experiments

uuagcccugCGGCCCCACGCACCAGGGUAAGagagacucacuucCUGCCCUGGCCCGAGGGACCGAcuggcugggc
((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure

--      cug   C   A  CA        A   aga 
  uuagcc   CGG CCC CG  CCAGGGUA Gag   c
  ||||||   ||| ||| ||  |||||||| |||    
  ggucgg   GCC GGG GC  GGUCCCGU cuu   u
cg      ucA   A   A  CC        C   cac 

Annotation confidence Medium

Genome context

chr13: 58023125-58023200 [-]

Mature mmu-miR-874-5p

• Accession: MIMAT0017268
• Description: Mus musculus mmu-miR-874-5p mature miRNA
• Sequence: 10 - CGGCCCCACGCACCAGGGUAAG - 31
• Evidence: experimental ; Illumina [3]

Mature mmu-miR-874-3p

• Accession: MIMAT0004853
• Description: Mus musculus mmu-miR-874-3p mature miRNA
• Sequence: 45 - CUGCCCUGGCCCGAGGGACCGA - 66
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009