Stem-loop mmu-mir-876

Accession

MI0005480

Symbol

MGI: Mir876

Description

Mus musculus mmu-mir-876 precursor miRNA mir-876

Gene
family

RF00935; mir-876

Literature search

4 open access papers mention mmu-mir-876
(35 sentences)

Sequence

15 reads, 3 reads per million, 9 experiments

ucacgugcuaUGGAUUUCUCUGUGAAUCACUAuaucaaaucuaguguggUAGUGGUUUACAAAGUAAUUCAuagugcuuca
....((((((((((((.((.(((((((((((((..((.......))..))))))))))))).)).))))))))))))....

Structure

ucac            U  C             au  aa 
    gugcuaUGGAUU CU UGUGAAUCACUAu  ca  u
    |||||||||||| || |||||||||||||  ||  c
    cgugauACUUAA GA ACAUUUGGUGAUg  gu  u
acuu            U  A             gu  ga 

Annotation confidence Not enough data

Genome context

chr4: 36645373-36645453 [-]

Mature mmu-miR-876-5p

• Accession: MIMAT0004854
• Description: Mus musculus mmu-miR-876-5p mature miRNA
• Sequence: 11 - UGGAUUUCUCUGUGAAUCACUA - 32
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-876-3p

• Accession: MIMAT0004855
• Description: Mus musculus mmu-miR-876-3p mature miRNA
• Sequence: 50 - UAGUGGUUUACAAAGUAAUUCA - 71
• Evidence: experimental ; Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009