Stem-loop mmu-mir-344-2

Accession

MI0005495

Symbol

MGI: Mir344-2

Description

Mus musculus mmu-mir-344-2 precursor miRNA mir-344

Gene
family

RF00825; mir-344

Literature search

9 open access papers mention mmu-mir-344-2
(32 sentences)

Sequence

16494 reads, 115 reads per million, 50 experiments

uuuuuaccAGUCAGGCUCCUGGCUAGAUUCCAGGuaccaacugguaccUGAUCUAGCCAAAGCCUGACUGUaagcugcaa
..(((((.(((((((((..(((((((((..((((((((....))))))))))))))))).))))))))))))))......

Structure

----uu     c         CC         UC        a 
      uuuac AGUCAGGCU  UGGCUAGAU  CAGGuacc a
      ||||| |||||||||  |||||||||  ||||||||  
      gaaUG UCAGUCCGA  ACCGAUCUA  GUccaugg c
aacguc     -         -A         --        u 

Annotation confidence Low

Genome context

chr7: 61940027-61940106 [-]

Mature mmu-miR-344-5p

• Accession: MIMAT0017038
• Description: Mus musculus mmu-miR-344-5p mature miRNA
• Sequence: 9 - AGUCAGGCUCCUGGCUAGAUUCCAGG - 34
• Evidence: experimental ; Illumina [3]

Mature mmu-miR-344-3p

• Accession: MIMAT0000593
• Description: Mus musculus mmu-miR-344-3p mature miRNA
• Sequence: 49 - UGAUCUAGCCAAAGCCUGACUGU - 71
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009