Stem-loop mmu-mir-466e

Accession

MI0005506

Symbol

MGI: Mir466e

Description

Mus musculus mmu-mir-466e precursor miRNA mir-466

Gene
family

RF04052; mir-466

Literature search

26 open access papers mention mmu-mir-466e
(79 sentences)

Sequence

21447 reads, 136.0 reads per million, 148 experiments

guguauguguUGAUGUGUGUGUACAUGUACAUaugugaauaugauauacauAUACAUACACGCACACAUAAGAcacauaugagc
..(((((((((.((((((((((..(((((..((((((.........)))))))))))..))))))))))..)))))))))....

Structure

--gu         -G          AC     CA      aau 
    guauguguU  AUGUGUGUGU  AUGUA  Uaugug   a
    |||||||||  ||||||||||  |||||  ||||||   u
    uauacacAG  UACACACGCA  UACAU  Auacau   g
cgag         AA          CA     --      aua 

Annotation confidence High

Genome context

chr2: 10479088-10479171 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from mmu-mir-466e

Mature mmu-miR-466e-5p

• Accession: MIMAT0004879
• Description: Mus musculus mmu-miR-466e-5p mature miRNA
• Sequence: 11 - UGAUGUGUGUGUACAUGUACAU - 32
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-466e-3p

• Accession: MIMAT0004880
• Description: Mus musculus mmu-miR-466e-3p mature miRNA
• Sequence: 52 - AUACAUACACGCACACAUAAGA - 73
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009