miRBase entry: mmu-mir-467c

Stem-loop mmu-mir-467c

Accession

MI0005512

Symbol

MGI: Mir467c

Description

Mus musculus mmu-mir-467c precursor miRNA

Literature search

19 open access papers mention mmu-mir-467c
(54 sentences)

Sequence

21980 reads, 398 reads per million, 101 experiments

ccuuugugcaUAAGUGCGUGCAUGUAUAUGUGuguauauuuuaugcAUAUACAUACACACACCUAUACacacaugcacacagacaugcgagaauggc
.((.(((((((..(((.(((.(((((((((((((.......))))))))))))).))).)))..........))))))).)).(((......)))..

Structure

--------------c  u       --------AA   C   C             ua 
               cu ugugcaU          GUG GUG AUGUAUAUGUGug  u
               || |||||||          ||| ||| |||||||||||||  a
               ga acacgua          CAC CAC UACAUAUAcguau  u
cgguaagagcguaca  c       cacaCAUAUC   A   A             uu

Annotation confidence High

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Genome context

chr2: 10473931-10474027 [+]

Clustered miRNAs

27 other miRNAs are < 10 kb from mmu-mir-467c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-467c-5p

Accession	MIMAT0004885
Description	Mus musculus mmu-miR-467c-5p mature miRNA
Sequence	11 - UAAGUGCGUGCAUGUAUAUGUG - 32
Evidence	experimental cloned [1], Illumina [2-3]
Database links
Predicted targets

Mature mmu-miR-467c-3p

Accession	MIMAT0017275
Description	Mus musculus mmu-miR-467c-3p mature miRNA
Sequence	47 - AUAUACAUACACACACCUAUAC - 68
Evidence	experimental Illumina [3]
Database links
Predicted targets

References

PubMed ID: 17604727
A mammalian microRNA expression atlas based on small RNA library sequencing
"Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
"Cell (2007) 129:1401-1414

PubMed ID: 20215419
MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
"Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
"Mol Hum Reprod (2010) 16:463-471

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009