Stem-loop mmu-mir-467d

Accession

MI0005513

Symbol

MGI: Mir467d

Description

Mus musculus mmu-mir-467d precursor miRNA

Literature search

20 open access papers mention mmu-mir-467d
(63 sentences)

Sequence

24486 reads, 127 reads per million, 102 experiments

ccugugugcaUAAGUGCGCGCAUGUAUAUGCGuguauauuuuaugcAUAUACAUACACACACCUACACacacaugcacacagaca
.((((((((((..(((.(.(.(((((((((((((.......))))))))))))).).).)))..........))))))))))...

Structure

--c          --------AA   C C C             ua 
   cugugugcaU          GUG G G AUGUAUAUGCGug  u
   ||||||||||          ||| | | |||||||||||||  a
   gacacacgua          CAC C C UACAUAUAcguau  u
aca          cacaCACAUC   A A A             uu 

Annotation confidence High

Genome context

chr2: 10507630-10507714 [+]

Clustered miRNAs

24 other miRNAs are < 10 kb from mmu-mir-467d

Mature mmu-miR-467d-5p

• Accession: MIMAT0004886
• Description: Mus musculus mmu-miR-467d-5p mature miRNA
• Sequence: 11 - UAAGUGCGCGCAUGUAUAUGCG - 32
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-467d-3p

• Accession: MIMAT0004887
• Description: Mus musculus mmu-miR-467d-3p mature miRNA
• Sequence: 47 - AUAUACAUACACACACCUACAC - 68
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009