Stem-loop mmu-mir-574

Accession

MI0005518

Symbol

MGI: Mir574

Description

Mus musculus mmu-mir-574 precursor miRNA

Literature search

38 open access papers mention mmu-mir-574
(233 sentences)

Sequence

13320 reads, 286 reads per million, 111 experiments

ugcgggcgugUGAGUGUGUGUGUGUGAGUGUGUgucgcuccaagucCACGCUCAUGCACACACCCACAcgcccgcacg
((((((((((((.(.(((((((((((((((((.(.(.......).)))))))))))))))))))))))))))))))..

Structure

--            A U                 U u gc 
  ugcgggcgugUG G GUGUGUGUGUGAGUGUG g c  u
  |||||||||||| | ||||||||||||||||| | |  c
  acgcccgcACAC C CACACACGUACUCGCAC c g  c
gc            - -                 - u aa 

Annotation confidence High

Genome context

chr5: 64970318-64970395 [+]

Mature mmu-miR-574-5p

• Accession: MIMAT0004893
• Description: Mus musculus mmu-miR-574-5p mature miRNA
• Sequence: 11 - UGAGUGUGUGUGUGUGAGUGUGU - 33
• Evidence: experimental ; cloned [1], Illumina [2]

Mature mmu-miR-574-3p

• Accession: MIMAT0004894
• Description: Mus musculus mmu-miR-574-3p mature miRNA
• Sequence: 47 - CACGCUCAUGCACACACCCACA - 68
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471