Stem-loop mmu-mir-449b

Accession

MI0005547

Symbol

MGI: Mir449b

Description

Mus musculus mmu-mir-449b precursor miRNA

Literature search

87 open access papers mention mmu-mir-449b
(340 sentences)

Sequence

1447 reads, 27.0 reads per million, 55 experiments

agacucggguAGGCAGUGUUGUUAGCUGGCUGCguugggucaggccagcAGCCACAGCUACCCUGCCACUUccuucuggc
(((...((((.(((((.((.(((.(.(((((((..(((......)))))))))))))).)).)))))))))...)))...

Structure

---   cuc    A     U  U   A C       gu   gu 
   aga   gggu GGCAG GU GUU G UGGCUGC  ugg  c
   |||   |||| ||||| || ||| | |||||||  |||   
   ucu   UUCA CCGUC CA CGA C ACCGAcg  acc  a
cgg   ucc    -     C  U   - -       --   gg 

Annotation confidence High

Genome context

13: 113173953-113174032 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-449b

Mature mmu-miR-449b-5p

• Accession: MIMAT0005447
• Description: Mus musculus mmu-miR-449b-5p mature miRNA
• Sequence: 11 - AGGCAGUGUUGUUAGCUGGCUGC - 33
• Evidence: not_experimental

Mature mmu-miR-449b-3p

• Accession: MIMAT0050692
• Description: Mus musculus mmu-miR-449b-3p mature miRNA
• Sequence: 50 - AGCCACAGCUACCCUGCCACUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414