Stem-loop mtr-MIR168a

Accession

MI0005603

Description

Medicago truncatula mtr-MIR168a precursor miRNA

Literature search

6 open access papers mention mtr-MIR168a
(23 sentences)

Sequence

cugauUUGCUUGGUGCUGGUCGGGAAccauuacauccacaguuuccguagaaacuuucccuuaguaaauuggaccccgucuugcaucaaucgaaucag
((((((((.(((((((.((.((((..(((((((......((((((....))))))........))))..)))..)))).)).))))))).))))))))

Structure

        C       U  U    AA   --    --auccac      c 
cugauUUG UUGGUGC GG CGGG  cca  uuac        aguuuc g
|||||||| ||||||| || ||||  |||  ||||        ||||||  
gacuaagc aacuacg uc gccc  ggu  aaug        ucaaag u
        u       u  u    ca   ua    auucccuu      a 

Annotation confidence Not enough data

Genome context

chr5: 41779400-41779497 [-]

Mature mtr-miR168a

• Accession: MIMAT0011089
• Description: Medicago truncatula mtr-miR168a mature miRNA
• Sequence: 6 - UUGCUUGGUGCUGGUCGGGAA - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: