Accession
MI0005676
Description
Physcomitrella patens
ppt-MIR893 precursor miRNA
Sequence
307
reads,
13.0
reads per million, 10 experiments
cucugcauugcucucaaaccuccucccucuuccuugUCCUAGCAUAGAUCCCAGUCCcuucuuccuugucuugaugcacgacccaauccucuccucuucuucuuuaucccgucauacccauacuaagacaagaaagaguuggaagagagaAUUGGGACUUGUGCUGGGACaaggaagaaaggaacuacuacuugcaccaagacaaggaaaaggaggagga
..................((((((((...(((((((((...(((.((.......(((.((((((((((((((...((((((((((((..((((.((((((.((((.((..(((.............)))..)).))))..))))))))))))))))..)))))).)))))))))))))).))).......))))).....)))))))))..)))))))).
..................((((((((...(((((((((...(((.((.......(((.((((((((((((((...((((((((((((..((((.((((((.((((.((..(((.............)))..)).))))..))))))))))))))))..)))))).)))))))))))))).))).......))))).....)))))))))..)))))))).
Structure
cucugcauugcucucaaa cuc --CUA U AUCCCAG c gau -- cc c -u a cc auacc
ccuccucc uuccuugUC GCA AG UCC uucuuccuugucuu gcacga cccaau ucuc ucuucu cuuu uc guc c
|||||||| ||||||||| ||| || ||| |||||||||||||| |||||| |||||| |||| |||||| |||| || ||| a
ggaggagg aaggaacag cgu uc agg aagaaggaaCAGGG CGUGUU GGGUUA agag agaagg gaga ag cag u
-----------------a -aa aacca - aucauca a --U CA -- - uu a aa aauca
Annotation confidence
Low
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Genome context
Chr10: 9627629-9627848 [-]
Database links
Mature ppt-miR893-5p
| Accession | MIMAT0053672 |
| Description | Physcomitrella patens ppt-miR893-5p mature miRNA |
| Sequence | 37 - UCCUAGCAUAGAUCCCAGUCC - 57 |
| Evidence |
experimental
unknown |
Mature ppt-miR893-3p
| Accession | MIMAT0004364 |
| Description | Physcomitrella patens ppt-miR893-3p mature miRNA |
| Sequence | 151 - AUUGGGACUUGUGCUGGGAC - 170 |
| Evidence |
experimental
cloned [1] |
References
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