Stem-loop ppt-MIR897

Accession

MI0005681

Description

Physcomitrella patens ppt-MIR897 precursor miRNA

Sequence

ucuuagcauucaaaugaccaaggugucgaugccaaaugccauucuuaucuUGAUCAAGUGGAAACUCAGCAAAugcggccacuucaacucuauucacuaucuugcacuugaugaaguaaagauucccaucucuaaagccuuuggcaacaucaucucuacccaaugucuuuauaaagcauccauucuuaucaaauuauaucuucuuggucacuucauaggcaag
.....((.......(((((((((((..(.(((((((.((...((((..(((.((((((((.((....((..((((.((.........)).))))..))...)).)))))))).)))..))))..............)).))))))).)..))).........(((.(((....)))))).......................))))))))........))...

Structure

ucuua  -auucaaa        -------------------------------------------------   uc a       u  -----------cau    au   G        G  ACUC  CA    c  cca 
     gc        ugaccaag                                                 gug  g ugccaaa gc              ucuu  cuU AUCAAGUG AA    AG  AAug gg   c
     ||        ||||||||                                                 |||  | ||||||| ||              ||||  ||| |||||||| ||    ||  |||| ||   u
     cg        acugguuc                                                 uac  c acgguuu cg              agaa  gaa uaguucac uu    uc  uuau uc   u
--gaa  gauacuuc        uucuauauuaaacuauucuuaccuacgaaauauuucuguaacccaucuc   ua a       c  aaaucucuacccuu    au   g        g  -cua  ac    c  aac 

Annotation confidence Not enough data

Genome context

Chr18: 7020972-7021194 [+]

Mature ppt-miR897

• Accession: MIMAT0004368
• Description: Physcomitrella patens ppt-miR897 mature miRNA
• Sequence: 51 - UGAUCAAGUGGAAACUCAGCAAA - 73
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17359535
   Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution
   Fattash I, Voss B, Reski R, Hess WR, Frank W
   BMC Plant Biol (2007) 7:13