Accession
MI0005682
Description
Physcomitrella patens
ppt-MIR899 precursor miRNA
Sequence
45360
reads,
1946.0
reads per million, 10 experiments
acggcguuuuucucggagaaaaauaccauccuuugguucaacaacgguugcugcguuuuccacguucggauacaacccugcccaguugcUGUGAGAGAUUGACGAGUGCAagaagacccucuuuccauguuccagacgcaggccuucgccgaacugagauacaucgcaaucgacacaccggccgcUUCAGAAUCAGUGACUAGCAUacccagcugcuauugg
.((((((((((((...))))))))((((.....)))).......(((((((.(.((..((((.((((((.......(((((......((((.((((((.....(.((........)).))))))))).)).......)))))......)))))))).)).)).).)))))))........)))).........(((((..((((.......)))).))))).
.((((((((((((...))))))))((((.....)))).......(((((((.(.((..((((.((((((.......(((((......((((.((((((.....(.((........)).))))))))).)).......)))))......)))))))).)).)).).)))))))........)))).........(((((..((((.......)))).))))).
Structure
-------------------------------------a guuuuucucggagaaaaauaccauccuuugguucaacaa u c uu - c auacaac -ccaguu - U UUGAC A GCA
cggc cgguugc g gu uc ca guucgg ccugc gc UG GAGAGA G GU a
|||| ||||||| | || || || |||||| ||||| || || |||||| | ||
gccg gcuaacg u ca ag gu caagcc ggacg ug ac cuuucu c ca g
gguuaucgucgacccaUACGAUCAGUGACUAAGACUUc -------------------------------gccacaca c a -u a - -gcuucc cagaccu u - ----- c gaa
Annotation confidence
Low
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Genome context
Chr13: 11433352-11433573 [+]
Database links
Mature ppt-miR899-5p
| Accession | MIMAT0053674 |
| Description | Physcomitrella patens ppt-miR899-5p mature miRNA |
| Sequence | 90 - UGUGAGAGAUUGACGAGUGCA - 110 |
| Evidence |
experimental
unknown |
Mature ppt-miR899-3p
| Accession | MIMAT0004369 |
| Description | Physcomitrella patens ppt-miR899-3p mature miRNA |
| Sequence | 186 - UUCAGAAUCAGUGACUAGCAU - 206 |
| Evidence |
experimental
cloned [1] |
References
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