Accession
MI0005684
Description
Physcomitrella patens
ppt-MIR901 precursor miRNA
Sequence
13910
reads,
579.0
reads per million, 10 experiments
uaaaaaaaauaauauguugauaauauaugugaaaguaaauaaguauuaccuaagauaaguugcuaaaaggucaaaggcagcaaagguaaaaguaaguaacaauggUGGCGACUAGGUUUAUGAUGGCAgcuaggauuuaagaggcggcuaGGUAAAGUGGCGGCUAGGUUAaguggcgacuaggguuucaucaaauggauguagaugaaguucagccauag
............(((.(((.((((((.(((........))).))))))..))).))).((((((...........))))))...............((((..((((.((.(((....((((..((((.(((...........))).)))).))))))).)).)))).)))).(((((((((...((((((((.....)))).))))..))))..)))))..
............(((.(((.((((((.(((........))).))))))..))).))).((((((...........))))))...............((((..((((.((.(((....((((..((((.(((...........))).)))).))))))).)).)))).)))).(((((((((...((((((((.....)))).))))..))))..)))))..
Structure
uaaaaaaaauaauauguugauaauauaugugaaaguaaauaaguauuaccuaagauaaguugcuaaaaggucaaaggcagcaaagguaaaaguaag aa G G AGGU GA A agga
uaac uggU GC ACU UUAU UGGC gcu u
|||| |||| || ||| |||| |||| ||| u
AUUG AUCG CG UGA AAUG aucg cgg u
----------------------------------------------gauaccgacuugaaguagauguagguaaacuacuuugggaucagcgguga -G G G ---- -G g agaa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
Chr13: 3937397-3937617 [+]
Database links
Mature ppt-miR901-5p
| Accession | MIMAT0053675 |
| Description | Physcomitrella patens ppt-miR901-5p mature miRNA |
| Sequence | 106 - UGGCGACUAGGUUUAUGAUGGCA - 128 |
| Evidence |
experimental
unknown |
Mature ppt-miR901-3p
| Accession | MIMAT0004371 |
| Description | Physcomitrella patens ppt-miR901-3p mature miRNA |
| Sequence | 151 - GGUAAAGUGGCGGCUAGGUUA - 171 |
| Evidence |
experimental
cloned [1] |
References
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