Accession
MI0005685
Description
Physcomitrella patens
ppt-MIR902a precursor miRNA
Literature search
3 open access papers mention ppt-MIR902a
(7 sentences)
(7 sentences)
Sequence
202902
reads,
8377.0
reads per million, 10 experiments
gcucgugacccucugaagggaacuuuggccugagaagagcgugggauuguaggaacaugaguggaucuacagcauuugagauuauucauuugcauccgcuacgaUAUGAUGCAGAUUCUUCACCUgugugauacucuugagguauaacagACGAAGGUCUGCAUCAUAGCcaagcgaacguaaaucuggugcauucaacacuagaugcuuaauugaggugcau
....((..((((....)))).))....((((.((..((((.......((((((..((....))..))))))(((..(((......)))..)))...((((....((((((((((((.((((..((((...(((((.....))))).))))..))))))))))))))))....)))).......((((((((.......))))))))))))..)).))))....
....((..((((....)))).))....((((.((..((((.......((((((..((....))..))))))(((..(((......)))..)))...((((....((((((((((((.((((..((((...(((((.....))))).))))..))))))))))))))))....)))).......((((((((.......))))))))))))..)).))))....
Structure
gcucgugacccucugaagggaacuuug g aa gugggauuguaggaacaugaguggaucuacagcauuugagauuauucauuugcauc acga U AC gug c
gccu ag gagc cgcu UAUGAUGCAGAU CUUC CUgu auacu u
|||| || |||| |||| |||||||||||| |||| |||| ||||| u
ugga uu uucg gcga AUACUACGUCUG GAAG gaca uaugg g
-----------------------uacg g aa --------------------------uagaucacaacuuacguggucuaaaugcaa acCG - CA --a a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr01: 4392280-4392502 [+]
Database links
Mature ppt-miR902a-5p
| Accession | MIMAT0004962 |
| Description | Physcomitrella patens ppt-miR902a-5p mature miRNA |
| Sequence | 105 - UAUGAUGCAGAUUCUUCACCU - 125 |
| Evidence |
experimental
454 [2] |
Mature ppt-miR902a-3p
| Accession | MIMAT0004372 |
| Description | Physcomitrella patens ppt-miR902a-3p mature miRNA |
| Sequence | 151 - ACGAAGGUCUGCAUCAUAGC - 170 |
| Evidence |
experimental
cloned [1], 454 [2] |
References
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