Accession
MI0005686
Description
Physcomitrella patens
ppt-MIR902b precursor miRNA
Literature search
2 open access papers mention ppt-MIR902b
(2 sentences)
(2 sentences)
Sequence
gguugugauaaaucgguuccgugucgucauaaucgcaaguguugcaggcaguuaugaggagauggagagcgugcagacuuguuuccuuccucuagccUAUGAUGCAGAUUCUUCAUCUguuuguuaucguucucaugguguacauaacagACGAAGGUCUGCAUCAUAGCcaagaggaagcaaaucuuaauaccuggcucgaauuuggccugcacgcaauuuu
((((......))))..((((((.((.(((((((.((..((...))..)).))))))).)).)))))).(((((((.....((((.((((((((.(.(((((((((((((.((((.(((((((((((((((....)))))).))).)))))).))))))))))))))))).).)))))))).))))..........((((.......)))))))))))......
((((......))))..((((((.((.(((((((.((..((...))..)).))))))).)).)))))).(((((((.....((((.((((((((.(.(((((((((((((.((((.(((((((((((((((....)))))).))).)))))).))))))))))))))))).).)))))))).))))..........((((.......)))))))))))......
Structure
gguugugauaaaucgguuccgugucgucauaaucgcaaguguugcaggcaguuaugaggagauggaga --------------------gacuu c a c U A - - u
gcgugca guuu cuuccucu g cUAUGAUGCAGAU CUUC UCUguu ugu uaucgu c
||||||| |||| |||||||| | ||||||||||||| |||| |||||| ||| ||||||
cgcacgu uaaa gaaggaga c GAUACUACGUCUG GAAG Agacaa aca guggua u
--------------------------------------------------------------uuuuaa ccgguuuaagcucgguccauaauuc c a C - C u u c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr07: 11978379-11978601 [+]
Database links
Mature ppt-miR902b-5p
| Accession | MIMAT0004963 |
| Description | Physcomitrella patens ppt-miR902b-5p mature miRNA |
| Sequence | 98 - UAUGAUGCAGAUUCUUCAUCU - 118 |
| Evidence |
experimental
454 [2] |
Mature ppt-miR902b-3p
| Accession | MIMAT0004373 |
| Description | Physcomitrella patens ppt-miR902b-3p mature miRNA |
| Sequence | 151 - ACGAAGGUCUGCAUCAUAGC - 170 |
| Evidence |
experimental
cloned [1], 454 [2] |
References
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