Stem-loop ame-mir-929

Accession

MI0005751

Description

Apis mellifera ame-mir-929 precursor miRNA

Sequence

2289 reads, 39.0 reads per million, 24 experiments

acuuaacuggggucAAAUUGACUCUAGUAGGGAGUcccugcauucaauauggcgaCUUCCUAAUAGAGUCAGGCUGAcuccuuuuaagacguucaacgga
.(((((..(((((((..(((((((((.(((((((((((............)).))))))))).)))))))))..)))))))..))))).(((...)))..

Structure

-----------a     cu       AA         G         -  ugcau 
            cuuaa  ggggucA  UUGACUCUA UAGGGAGUc cc     u
            |||||  |||||||  ||||||||| ||||||||| ||      
            gaauu  ccucAGU  GACUGAGAU AUCCUUCag gg     c
aggcaacuugca     uu       CG         A         c  uauaa 

Annotation confidence High

Genome context

CM000066.5: 7057901-7058000 [-]

Mature ame-miR-929-5p

• Accession: MIMAT0004441
• Description: Apis mellifera ame-miR-929-5p mature miRNA
• Sequence: 15 - AAAUUGACUCUAGUAGGGAGU - 35
• Evidence: experimental ; RTPCR [1], Illumina [2]

Mature ame-miR-929-3p

• Accession: MIMAT0053078
• Description: Apis mellifera ame-miR-929-3p mature miRNA
• Sequence: 56 - CUUCCUAAUAGAGUCAGGCUGA - 77
• Evidence: experimental ; RTPCR [1], Illumina [2]

References

1. PubMed ID: 17543122
   Computational and transcriptional evidence for microRNAs in the honey bee genome
   Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
   Genome Biol (2007) 8:R97


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670