Stem-loop pta-MIR159c

Accession

MI0005780

Description

Pinus taeda pta-MIR159c precursor miRNA

Gene family

MIPF0000010; MIR159

Sequence

gaugugugaaugaugcgggagcugauuuuguccaggaaaugucuuuucCUUGGAUUGAAGGGAGCUCCCuuauguagcauacauu
((((((((....(((.(((((((..(((.((((((((((.....))))).))))).)))...))))))).)))....))))))))

Structure

        aaug   c       -ga   u     -     u 
gaugugug    aug gggagcu   uuu gucca ggaaa g
||||||||    ||| |||||||   ||| ||||| ||||| u
uuacauac    uau CCCUCGA   AAG UAGGU Ccuuu c
        gaug   u       GGG   U     U     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR159c

• Accession: MIMAT0004992
• Description: Pinus taeda pta-miR159c mature miRNA
• Sequence: 49 - CUUGGAUUGAAGGGAGCUCCC - 69
• Evidence: not_experimental

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098