Stem-loop pta-MIR166a

Accession

MI0005782

Description

Pinus taeda pta-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

uugauugaggggaauguugucuggcucgacuucauccggauuugggcuccaauguucggaugccgUCGGACCAGGCUUCAUUCCCCccaaucgg
.((((((.((((((((..((((((.(((((..(((((((((((((...)))).)))))))))..))))).))))))..)))))))).)))))).

Structure

u      a        uu      c     uu         -    g 
 ugauug ggggaaug  gucugg ucgac  cauccggau uugg  
 |||||| ||||||||  |||||| |||||  ||||||||| |||| c
 gcuaac CCCCUUAC  CGGACC GGCUg  guaggcuug aacc  
g      c        UU      A     cc         u    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR166a

• Accession: MIMAT0004993
• Description: Pinus taeda pta-miR166a mature miRNA
• Sequence: 66 - UCGGACCAGGCUUCAUUCCCC - 86
• Evidence: not_experimental

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098