Stem-loop pta-MIR949

Accession

MI0005798

Description

Pinus taeda pta-MIR949 precursor miRNA

Sequence

agagccUCUCCGGGAAUCCAAUGCGCCuuccucuugaacgccuuucaacgcgcgugcugugcgugaaaacgcguuuaggaggaagguguauugauuuccggggaagcccu
((.((.((((((((((((.((((((((((((((((((((((.(((((.(((((.....))))))))))..)))))))))))))))))))))))))))))))))).)).))

Structure

  a  c            C                      -c     a     g 
ag gc UCUCCGGGAAUC AAUGCGCCuuccucuugaacgc  uuuca cgcgc u
|| || |||||||||||| ||||||||||||||||||||||  ||||| ||||| g
uc cg aggggccuuuag uuauguggaaggaggauuugcg  aaagu gcgug c
  c  a            -                      ca     -     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR949

• Accession: MIMAT0005009
• Description: Pinus taeda pta-miR949 mature miRNA
• Sequence: 7 - UCUCCGGGAAUCCAAUGCGCC - 27
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098