Stem-loop dme-mir-iab-8

Accession

MI0005805

Description

Drosophila melanogaster dme-mir-iab-8 precursor miRNA mir-iab-4

Gene
family

RF00725; mir-iab-4

Sequence

223 reads, 14 reads per million, 29 experiments

ucgugUUACGUAUACUGAAGGUAUACCGgauaggauacacucaGGAUACAUUCAGUAUACGUUUAcga
(((((..((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))).)))))

Structure

     UU            G    A  G  ua g 
ucgug  ACGUAUACUGAA GUAU CC ga  g a
|||||  |||||||||||| |||| || ||  |  
agcAU  UGCAUAUGACUU CAUA GG cu  c u
     -U            A    -  a  ca a 

Annotation confidence High

Genome context

chr3R: 16856275-16856342 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dme-mir-iab-8

Mature dme-miR-iab-8-5p

• Accession: MIMAT0005463
• Description: Drosophila melanogaster dme-miR-iab-8-5p mature miRNA
• Sequence: 6 - UUACGUAUACUGAAGGUAUACCG - 28
• Evidence: experimental ; 454 [1], in-situ [2]

Mature dme-miR-iab-8-3p

• Accession: MIMAT0005464
• Description: Drosophila melanogaster dme-miR-iab-8-3p mature miRNA
• Sequence: 44 - GGAUACAUUCAGUAUACGUUUA - 65
• Evidence: experimental ; 454 [1], in-situ [2]

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864


2. PubMed ID: 18172160
   A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
   "Stark A, Bushati N, Jan CH, Kheradpour P, Hodges E, Brennecke J, Bartel DP, Cohen SM, Kellis M"
   "Genes Dev (2008) 22:8-13