Accession
MI0005815
Description
Drosophila melanogaster
dme-mir-960 precursor miRNA mir-960
Gene
family?
family?
RF03377;
mir-960
Literature search
1 open access papers mention dme-mir-960
(1 sentences)
(1 sentences)
Sequence
1788
reads,
147
reads per million, 44 experiments
ggguuuuguaccacauucUGAGUAUUCCAGAUUGCAUAGCuuugugcuacuauugcUAUACGGUCUGGGACACUUUUAacaugguaucaaauc
.(((((.((((((......((((.((((((((((.(((((..((......))..))))).)))))))))).))))......)))))).)))))
.(((((.((((((......((((.((((((((((.(((((..((......))..))))).)))))))))).))))......)))))).)))))
Structure
g u cauucU A C uu ug gguuu guacca GAGU UUCCAGAUUG AUAGC ug c ||||| |||||| |||| |||||||||| ||||| || cuaaa uauggu UUCA AGGGUCUGGC UAUcg au u - c acaAUU C A uu ca
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2L: 5641063-5641155 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dme-mir-960
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-960-5p
| Accession | MIMAT0005474 |
| Description | Drosophila melanogaster dme-miR-960-5p mature miRNA |
| Sequence | 19 - UGAGUAUUCCAGAUUGCAUAGC - 40 |
| Evidence |
experimental
454 [1] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-960-3p
| Accession | MIMAT0020855 |
| Description | Drosophila melanogaster dme-miR-960-3p mature miRNA |
| Sequence | 57 - UAUACGGUCUGGGACACUUUUA - 78 |
| Evidence | not_experimental |
| Database links |
|
References
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