Stem-loop dme-mir-992

Accession

MI0005852

Description

Drosophila melanogaster dme-mir-992 precursor miRNA mir-992

Gene
family

RF03913; mir-992

Literature search

3 open access papers mention dme-mir-992
(6 sentences)

Sequence

2709 reads, 656 reads per million, 20 experiments

auuuucccaagugccUGGUAUCAGCAAAGUGUUAUUUuuuauguuuauguaaAGUACACGUUUCUGGUACUAAGuacuucgagaaaguuacc
(((((((.((((((.(((((((((.(((((((.(((((.(((....))).))))))))).)))))))))))).)))))).).))))))....

Structure

----      - c      c         C   -    U     u   g 
    auuuuc c aagugc UGGUAUCAG AAA GUGU AUUUu uau u
    |||||| | |||||| ||||||||| ||| |||| ||||| |||  
    ugaaag g uucauG AUCAUGGUC UUU CACA UGAaa gua u
ccau      a c      A         -   G    -     u   u 

Annotation confidence High

Genome context

chr2R: 20585314-20585405 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from dme-mir-992

Mature dme-miR-992-3p

• Accession: MIMAT0005510
• Description: Drosophila melanogaster dme-miR-992-3p mature miRNA
• Sequence: 53 - AGUACACGUUUCUGGUACUAAG - 74
• Evidence: experimental ; 454 [1]

Mature dme-miR-992-5p

• Accession: MIMAT0020891
• Description: Drosophila melanogaster dme-miR-992-5p mature miRNA
• Sequence: 16 - UGGUAUCAGCAAAGUGUUAUUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864