Stem-loop dme-mir-993

Accession

MI0005854

Description

Drosophila melanogaster dme-mir-993 precursor miRNA

Literature search

3 open access papers mention dme-mir-993
(5 sentences)

Sequence

79919 reads, 885 reads per million, 45 experiments

aacgcucccgugaccUACCCUGUAGUUCCGGGCUUUUGuuuaaauggcguucggcacauugucggacugcuggcucgauuaucaGAAGCUCGUCUCUACAGGUAUCUcacaggguagaa
....(((((((((..((((.(((((...((((((((((......((((((((((((...)))))))).))))..........))))))))))...)))))))))..)))).))).))..

Structure

aacg  -   -    cc    C     UUC          ----uuuaaa    -        c 
    cu ccc guga  UACC UGUAG   CGGGCUUUUG          uggc guucggca  
    || ||| ||||  |||| |||||   ||||||||||          |||| |||||||| a
    ga ggg cacU  AUGG ACAUC   GCUCGAAGac          gucg caggcugu  
--aa  u   a    CU    -     UCU          uauuagcucg    u        u 

Annotation confidence High

Genome context

chr3R: 6776333-6776451 [+]

Mature dme-miR-993-3p

• Accession: MIMAT0005512
• Description: Drosophila melanogaster dme-miR-993-3p mature miRNA
• Sequence: 85 - GAAGCUCGUCUCUACAGGUAUCU - 107
• Evidence: experimental ; 454 [1]

Mature dme-miR-993-5p

• Accession: MIMAT0020893
• Description: Drosophila melanogaster dme-miR-993-5p mature miRNA
• Sequence: 16 - UACCCUGUAGUUCCGGGCUUUUG - 38
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864