Stem-loop dme-mir-1006

Accession

MI0005867

Description

Drosophila melanogaster dme-mir-1006 precursor miRNA mir-1006

Gene
family

RF03321; mir-1006

Literature search

1 open access papers mention dme-mir-1006
(1 sentences)

Sequence

3919 reads, 73 reads per million, 49 experiments

gUGAGUUUGAAAUUGAAAUGCGUAAAuuguuugguacaauuUAAAUUCGAUUUCUUAUUCAUAG
((((((..(((((((((.....((((((((.....))))))))..)))))))))..))))))..

Structure

--      UU         AUGCG        u 
  gUGAGU  GAAAUUGAA     UAAAuugu u
  ||||||  |||||||||     |||||||| g
  UACUUA  CUUUAGCUU     AUuuaaca g
GA      UU         ---AA        u 

Annotation confidence Medium

Genome context

chr2L: 16724795-16724858 [-]

Mature dme-miR-1006-3p

• Accession: MIMAT0005019
• Description: Drosophila melanogaster dme-miR-1006-3p mature miRNA
• Sequence: 42 - UAAAUUCGAUUUCUUAUUCAUAG - 64
• Evidence: experimental ; 454 [1]

Mature dme-miR-1006-5p

• Accession: MIMAT0020903
• Description: Drosophila melanogaster dme-miR-1006-5p mature miRNA
• Sequence: 2 - UGAGUUUGAAAUUGAAAUGCGUAAA - 26
• Evidence: not_experimental

References

1. PubMed ID: 17589500
   Intronic microRNA precursors that bypass Drosha processing
   "Ruby JG, Jan CH, Bartel DP"
   "Nature (2007) 448:83-86