Stem-loop dme-mir-1010

Accession

MI0005871

Description

Drosophila melanogaster dme-mir-1010 precursor miRNA mir-1010

Gene
family

RF03283; mir-1010

Literature search

2 open access papers mention dme-mir-1010
(2 sentences)

Sequence

16477 reads, 299 reads per million, 49 experiments

GUAAGUGGUGUAGAUGAAACAaauuuaccaacaauuuuguuggauugUUUCACCUAUCGUUCCAUUUGCAG
((((((((.((((.((((((((.....((((((....)))))).)))))))).))))....))))))))..

Structure

--        ---U    A        auuua      a 
  GUAAGUGG    GUAG UGAAACAa     ccaaca u
  ||||||||    |||| ||||||||     ||||||  
  CGUUUACC    UAUC ACUUUguu     gguugu u
GA        UUGC    C        ----a      u 

Annotation confidence Medium

Genome context

chr3R: 22292879-22292949 [+]

Mature dme-miR-1010-3p

• Accession: MIMAT0005023
• Description: Drosophila melanogaster dme-miR-1010-3p mature miRNA
• Sequence: 48 - UUUCACCUAUCGUUCCAUUUGCAG - 71
• Evidence: experimental ; 454 [1]

Mature dme-miR-1010-5p

• Accession: MIMAT0020905
• Description: Drosophila melanogaster dme-miR-1010-5p mature miRNA
• Sequence: 1 - GUAAGUGGUGUAGAUGAAACA - 21
• Evidence: not_experimental

References

1. PubMed ID: 17589500
   Intronic microRNA precursors that bypass Drosha processing
   "Ruby JG, Jan CH, Bartel DP"
   "Nature (2007) 448:83-86