Accession
MI0005914
Description
Physcomitrella patens
ppt-MIR166k precursor miRNA
Literature search
2 open access papers mention ppt-MIR166k
(5 sentences)
(5 sentences)
Sequence
gaagaugcuggaugugccuuugccgugaggaaugacguauggcccgaagcuaucucuuggauggccuugaugaagcUCCGGACCAGGCUUCAUUCCCcucggcggaguugcaaauguggacac
.....(((((.((.(((((((((((.(.(((((((.((.(((.(((.((((.((((..((....))..)).)))))).))).))).)).))))))).).))))))))..))).)).))).)).
.....(((((.((.(((((((((((.(.(((((((.((.(((.(((.((((.((((..((....))..)).)))))).))).))).)).))))))).).))))))))..))).)).))).)).
Structure
gaaga - g g -- u a c a c a a - uu a
ug cug au ugc cuuugccg g ggaauga gu ugg ccg agcu uc uc gg u
|| ||| || ||| |||||||| | ||||||| || ||| ||| |||| || || ||
ac ggu ua acg gaggcggc c CCUUACU CG ACC GGC Ucga ag ag cc g
----c a g a uu u C U G A C - u uu g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr27: 682470-682592 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppt-MIR166k
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR166k
| Accession | MIMAT0005047 |
| Description | Physcomitrella patens ppt-miR166k mature miRNA |
| Sequence | 77 - UCCGGACCAGGCUUCAUUCCC - 97 |
| Evidence |
experimental
454 [1] |
References
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