Accession
MI0005929
Description
Physcomitrella patens
ppt-MIR533d precursor miRNA
Sequence
61500
reads,
2503.0
reads per million, 10 experiments
cagcaucagcucaggggcaguagcauggaGAGCUGUUCAGACUCUGAGAGagggguguggaaaacauguacuguuguaucgacacucgucgCUCACAGUCUGCACAGCUCUCuguguugcucccucuaauugacuuca
.(((....))).(((((.((((((((((((((((((.((((((.((((.((.((((((.((..(((........))).)).)))))).)).)))).)))))).)))))))))))))))))).)))))...........
.(((....))).(((((.((((((((((((((((((.((((((.((((.((.((((((.((..(((........))).)).)))))).)).)))).)))))).)))))))))))))))))).)))))...........
Structure
cagcaucagcuc c U C A g g aa ugu
agggg aguagcauggaGAGCUGU CAGACU UGAG Ga gggugu ga aca a
||||| |||||||||||||||||| |||||| |||| || |||||| || |||
ucucc ucguuguguCUCUCGACA GUCUGA ACUC cu cucaca cu ugu c
-acuucaguuaa c C C g g g -a ugu
Annotation confidence
High
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Genome context
Chr18: 6390979-6391116 [+]
Database links
Mature ppt-miR533d-5p
| Accession | MIMAT0053709 |
| Description | Physcomitrella patens ppt-miR533d-5p mature miRNA |
| Sequence | 30 - GAGCUGUUCAGACUCUGAGAG - 50 |
| Evidence |
experimental
unknown |
Mature ppt-miR533d-3p
| Accession | MIMAT0005062 |
| Description | Physcomitrella patens ppt-miR533d-3p mature miRNA |
| Sequence | 92 - CUCACAGUCUGCACAGCUCUC - 112 |
| Evidence |
experimental
454 [1] |
References
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