Stem-loop ppt-MIR902f

Accession

MI0005940

Description

Physcomitrella patens ppt-MIR902f precursor miRNA

Literature search

2 open access papers mention ppt-MIR902f
(2 sentences)

Sequence

gagagaaugcucuuuugccuucgcuaagaUAUGAUGCAGAUUCUUCAUCUgcgggauauucuugcgugguauaacagACGAAGAUCUGCAUCAUAACcaagcgggaguaaacauugugcuacc
(((((....)))))((((.((((((..(.((((((((((((.((((.(((((((((...))))))((......))))).)))))))))))))))).)..)))))).)))).............

Structure

gagagaaugcucuu    c      aa a            U    A   ----------      u 
              uugc uucgcu  g UAUGAUGCAGAU CUUC UCU          gcggga  
              |||| ||||||  | |||||||||||| |||| |||          |||||| a
              aaug gggcga  C AUACUACGUCUA GAAG Aga          cguucu  
-ccaucguguuaca    a      ac A            -    C   caauauggug      u 

Annotation confidence Not enough data

Genome context

Chr02: 22774290-22774412 [+]

Mature ppt-miR902f-5p

• Accession: MIMAT0005075
• Description: Physcomitrella patens ppt-miR902f-5p mature miRNA
• Sequence: 30 - UAUGAUGCAGAUUCUUCAUCU - 50
• Evidence: experimental ; 454 [1]

Mature ppt-miR902f-3p

• Accession: MIMAT0005076
• Description: Physcomitrella patens ppt-miR902f-3p mature miRNA
• Sequence: 78 - ACGAAGAUCUGCAUCAUAAC - 97
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769